Pseudomonas aeruginosa UCBPP-PA14, PA14_46270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00580
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003678 DNA helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 2 137 6.7E-16
PANTHER PTHR11070 UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER IPR000212 DNA helicase, UvrD/REP type 445 516 1.2E-52
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 243 331 1.9E-18
Gene3D G3DSA:1.10.10.160 - IPR013986 DExx box DNA helicase domain superfamily 220 242 1.9E-18
Pfam PF13538 UvrD-like helicase C-terminal domain IPR027785 UvrD-like helicase C-terminal domain 448 482 2.0E-6
Pfam PF00580 UvrD/REP helicase N-terminal domain IPR014016 UvrD-like helicase, ATP-binding domain 11 329 2.1E-24
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 344 526 9.4E-14
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 513 4.94E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.