Pseudomonas aeruginosa UCBPP-PA14, PA14_47210 (cyoA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000292
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022900 electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06481
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR22888
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009486 cytochrome bo3 ubiquinol oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06481
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000292 Ubiqnol_oxid_II IPR006333 Cytochrome o ubiquinol oxidase subunit II 1 310 0.0
Gene3D G3DSA:1.10.287.90 - IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 26 111 6.6E-32
PANTHER PTHR22888 CYTOCHROME C OXIDASE, SUBUNIT II IPR045187 Cytochrome c/quinol oxidase subunit II 23 240 2.6E-36
NCBIfam TIGR01433 JCVI: ubiquinol oxidase subunit II IPR006333 Cytochrome o ubiquinol oxidase subunit II 15 237 1.1E-116
CDD cd04212 CuRO_UO_II IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain 126 224 7.1409E-65
Pfam PF06481 COX Aromatic Rich Motif IPR010514 COX aromatic rich motif 237 282 2.2E-15
Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain IPR002429 Cytochrome c oxidase subunit II-like C-terminal 148 217 4.7E-7
FunFam G3DSA:2.60.40.420:FF:000008 Ubiquinol oxidase subunit 2 - - 112 279 3.0E-85
FunFam G3DSA:1.10.287.90:FF:000002 Ubiquinol oxidase subunit 2 - - 26 111 1.4E-43
Gene3D G3DSA:2.60.40.420 - IPR008972 Cupredoxin 112 279 1.2E-48
SUPERFAMILY SSF81464 Cytochrome c oxidase subunit II-like, transmembrane region IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 26 116 3.43E-23
SUPERFAMILY SSF49503 Cupredoxins IPR008972 Cupredoxin 119 278 2.32E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.