Pseudomonas aeruginosa UCBPP-PA14, PA14_47670 (cobT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43463
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03160
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43463 NICOTINATE-NUCLEOTIDE--DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 3 348 2.1E-114
Gene3D G3DSA:1.10.1610.10 - IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal 12 339 2.0E-127
Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, bacterial type 12 348 37.069443
CDD cd02439 DMB-PRT_CobT IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 29 344 3.38387E-127
Pfam PF02277 Phosphoribosyltransferase IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 11 346 1.1E-130
Gene3D G3DSA:3.40.50.10210 - IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily 57 329 2.0E-127
FunFam G3DSA:3.40.50.10210:FF:000001 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase - - 57 329 1.3E-109
SUPERFAMILY SSF52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily 4 347 8.63E-120
NCBIfam TIGR03160 JCVI: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, bacterial type 14 346 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.