Pseudomonas aeruginosa UCBPP-PA14, PA14_48090 (aprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01844 JCVI: TolC family outer membrane protein IPR010130 Type I secretion outer membrane protein, TolC 24 444 0.0
FunFam G3DSA:1.20.1600.10:FF:000014 Alkaline protease secretion protein AprF - - 27 447 0.0
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 247 430 2.7E-32
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 27 447 1.5E-81
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 26 440 1.96E-86
PANTHER PTHR30026 OUTER MEMBRANE PROTEIN TOLC - - 1 442 2.2E-93
Coils Coil Coil - - 148 168 -
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 31 219 6.3E-25
MobiDBLite mobidb-lite consensus disorder prediction - - 462 481 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.