Pseudomonas aeruginosa UCBPP-PA14, PA14_48240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 63 256 4.0E-21
SUPERFAMILY SSF56954 6 471 1.44E-80
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 44 468 3.5E-72
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 288 466 2.9E-14
Gene3D G3DSA:1.20.1600.10 53 469 3.4E-97
Gene3D G3DSA:2.20.200.10 100 357 3.4E-97
Coils Coil 294 314 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.