Pseudomonas aeruginosa UCBPP-PA14, PA14_48300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 476 500 6.28E-60
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 14 503 28.179
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 251 422 6.28E-60
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 5.0
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 7 192 6.28E-60
Gene3D G3DSA:1.20.1720.10 19 220 4.1E-34
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 19 412 4.8E-43
CDD cd06174 MFS IPR020846 Major facilitator superfamily domain 19 421 6.79326E-19
TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family IPR004638 Drug resistance transporter EmrB/QacA subfamily 19 494 2.7E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.