Pseudomonas aeruginosa UCBPP-PA14, PA14_48880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00589
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00589
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015074 DNA integration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00589
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Related to phage, transposon, or plasmid Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.443.10 Intergrase catalytic core IPR013762 Integrase-like, catalytic domain superfamily 162 329 5.4E-40
Gene3D G3DSA:1.10.150.130 - IPR010998 Integrase/recombinase, N-terminal 53 161 4.1E-5
Pfam PF00589 Phage integrase family IPR002104 Integrase, catalytic domain 163 312 7.3E-19
SUPERFAMILY SSF56349 DNA breaking-rejoining enzymes IPR011010 DNA breaking-rejoining enzyme, catalytic core 60 320 7.36E-47
CDD cd00796 INT_Rci_Hp1_C - - 163 310 8.26978E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.