Pseudomonas aeruginosa UCBPP-PA14, PA14_49280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53955 | Lysozyme-like | IPR023346 | Lysozyme-like domain superfamily | 10 | 322 | 6.56E-98 |
| SUPERFAMILY | SSF47090 | PGBD-like | IPR036365 | PGBD-like superfamily | 324 | 393 | 3.14E-14 |
| Gene3D | G3DSA:1.10.8.350 | Bacterial muramidase | - | - | 34 | 200 | 6.7E-80 |
| FunFam | G3DSA:1.10.8.350:FF:000001 | Lytic murein transglycosylase B | - | - | 123 | 200 | 1.9E-25 |
| Gene3D | G3DSA:1.10.530.10 | - | - | - | 67 | 315 | 6.7E-80 |
| NCBIfam | TIGR02283 | JCVI: lytic murein transglycosylase | IPR011970 | Lytic murein transglycosylase | 25 | 319 | 9.1E-110 |
| PANTHER | PTHR30163 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE B | IPR043426 | Membrane-bound lytic murein transglycosylase B-like | 4 | 389 | 0.0 |
| Pfam | PF01471 | Putative peptidoglycan binding domain | IPR002477 | Peptidoglycan binding-like | 339 | 393 | 4.3E-11 |
| Pfam | PF13406 | Transglycosylase SLT domain | IPR031304 | Transglycosylase SLT domain 2 | 25 | 316 | 4.4E-103 |
| CDD | cd13399 | Slt35-like | - | - | 107 | 235 | 3.67466E-19 |
| Gene3D | G3DSA:1.10.101.10 | - | IPR036366 | PGBD superfamily | 332 | 395 | 1.2E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.