Pseudomonas aeruginosa UCBPP-PA14, PA14_49320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_49320
Name
Replicon chromosome
Genomic location 4382230 - 4382901 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_792099.1
GI 116049099
Entrez 4380115
INSDC ABJ10335.1
NCBI Locus Tag PA14_49320
UniParc UPI0000396619
UniProtKB Acc Q02IY7
UniProtKB ID Q02IY7_PSEAB
UniRef100 UniRef100_Q02IY7
UniRef50 UniRef50_W0YM96
UniRef90 UniRef90_W0YM96

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.71
Kyte-Doolittle Hydrophobicity Value -0.583
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 10.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1VAV LYASE 02/19/04 Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 99.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001125 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_49320

Human Homologs

References

No references are associated with this feature.