Pseudomonas aeruginosa UCBPP-PA14, PA14_49440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class
Transcriptional regulators Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.10.10:FF:000099 Two-component system response regulator TorR - - 125 235 5.9E-40
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 133 233 1.16E-28
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 156 232 3.4E-26
FunFam G3DSA:3.40.50.2300:FF:000001 DNA-binding response regulator PhoB - - 5 84 8.4E-24
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 132 235 1.7E-34
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 6 116 4.6E-37
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 8 117 4.4E-23
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 143 232 2.26705E-33
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 5 125 6.12E-38
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 156 232 1.9E-24
Gene3D G3DSA:6.10.250.690 - - - 90 122 1.6E-16
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 7 231 8.8E-53
Gene3D G3DSA:3.40.50.2300 - - - 7 89 7.0E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.