Pseudomonas aeruginosa UCBPP-PA14, PA14_49900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class
Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 53 168 45.326
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 5.0
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 52 165 3.79E-33
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 65 159 1.3E-20
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 30 168 4.3E-49
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 65 87 1.6E-11
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 110 126 1.6E-11
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 95 110 1.6E-11
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 63 165 1.20471E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.