Pseudomonas aeruginosa UCBPP-PA14, PA14_49930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17783 CvfB-like winged helix domain IPR040764 Conserved virulence factor B-like, winged helix domain 220 277 4.5E-22
Pfam PF13509 S1 domain IPR039566 Conserved virulence factor B, S1 domain 73 131 7.7E-9
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 7 72 6.1E-7
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 146 214 2.3E-5
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 217 277 1.3E-22
Pfam PF13509 S1 domain IPR039566 Conserved virulence factor B, S1 domain 4 66 1.4E-21
SMART SM00316 S1_6 IPR022967 RNA-binding domain, S1 146 208 0.87
SMART SM00316 S1_6 IPR022967 RNA-binding domain, S1 71 133 6.9
PIRSF PIRSF012524 YitL_S1 IPR014464 Conserved virulence factor B 1 279 5.4E-104
PANTHER PTHR37296 CONSERVED VIRULENCE FACTOR B IPR014464 Conserved virulence factor B 1 277 1.5E-101
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 75 145 6.3E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.