Pseudomonas aeruginosa UCBPP-PA14, PA14_50220 (fleQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006351 transcription, DNA-templated
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1097
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9287015
Biological Process GO:2000155 positive regulation of cilium-dependent cell motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1097
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12218010
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1097
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12218010
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1097
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12218010
Biological Process GO:0045785 positive regulation of cell adhesion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1097
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12218010
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 434 480 1.7E-9
FunFam G3DSA:1.10.8.60:FF:000037 Sigma-54-dependent Fis family transcriptional regulator - - 318 394 2.1E-51
Gene3D G3DSA:1.10.10.60 - - - 426 483 8.6E-12
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 188 8.08E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 136 317 1.5E-69
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 444 461 1.6E-8
Gene3D G3DSA:1.10.8.60 - - - 318 394 3.9E-22
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 166 310 8.6E-11
Gene3D G3DSA:3.40.50.2300 - - - 1 135 1.1E-63
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 438 478 1.0E-12
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 146 387 4.57E-71
FunFam G3DSA:1.10.10.60:FF:000260 Fis family transcriptional regulator - - 412 483 1.1E-37
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 461 481 1.6E-8
CDD cd00009 AAA - - 165 308 1.19689E-23
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 5 484 0.0
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 137 316 3.3E-83
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 146 313 7.0E-76
Pfam PF06490 Flagellar regulatory protein FleQ IPR010518 Flagellar regulatory FleQ 6 123 1.3E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.