Pseudomonas aeruginosa UCBPP-PA14, PA14_51205

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00346	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.30.450.40:FF:000098	IclR family transcriptional regulator	-	-	90	257	3.4E-115
Pfam	PF09339	IclR helix-turn-helix domain	IPR005471	Transcription regulator IclR, N-terminal	17	64	1.9E-12
SMART	SM00346	iclrneu	IPR005471	Transcription regulator IclR, N-terminal	15	104	1.7E-12
Gene3D	G3DSA:3.30.450.40	-	IPR029016	GAF-like domain superfamily	90	257	2.0E-25
Pfam	PF01614	Bacterial transcriptional regulator	IPR014757	Transcription regulator IclR, C-terminal	134	253	7.6E-10
PANTHER	PTHR30136	HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY	-	-	1	259	5.8E-45
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	15	86	4.17E-12
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	10	87	7.4E-14
SUPERFAMILY	SSF55781	GAF domain-like	-	-	73	255	6.54E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.