Pseudomonas aeruginosa UCBPP-PA14, PA14_52180 (relA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015969 guanosine tetraphosphate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04607
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 18 218 1.79E-49
CDD cd01668 TGS_RSH IPR033655 RelA/SpoT, TGS domain 417 475 6.22135E-34
Pfam PF04607 Region found in RelA / SpoT proteins IPR007685 RelA/SpoT 262 370 8.4E-38
SMART SM00954 RelA_SpoT_2 IPR007685 RelA/SpoT 262 372 3.9E-66
Pfam PF13291 ACT domain IPR002912 ACT domain 666 743 1.0E-18
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 667 743 5.0E-15
NCBIfam TIGR00691 JCVI: RelA/SpoT family protein IPR004811 RelA/SpoT family 69 742 0.0
SUPERFAMILY SSF81301 Nucleotidyltransferase IPR043519 Nucleotidyltransferase superfamily 207 420 2.62E-63
Pfam PF13328 HD domain - - 40 202 3.3E-45
PANTHER PTHR21262 GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE - - 18 743 0.0
SUPERFAMILY SSF81271 TGS-like IPR012676 TGS-like 407 475 5.01E-22
FunFam G3DSA:1.10.3210.10:FF:000033 GTP pyrophosphokinase - - 11 218 0.0
FunFam G3DSA:3.30.70.260:FF:000075 GTP pyrophosphokinase - - 666 746 1.8E-52
FunFam G3DSA:3.10.20.30:FF:000002 GTP pyrophosphokinase (RelA/SpoT) - - 409 482 1.0E-31
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2 IPR043519 Nucleotidyltransferase superfamily 219 352 4.8E-49
Pfam PF02824 TGS domain IPR004095 TGS 416 475 1.4E-21
FunFam G3DSA:3.30.460.10:FF:000001 GTP pyrophosphokinase RelA - - 219 352 6.7E-59
CDD cd04876 ACT_RelA-SpoT - - 672 743 1.88064E-21
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 409 483 1.5E-31
Gene3D G3DSA:3.30.70.260 - - - 666 746 2.2E-18
Pfam PF19296 RelA/SpoT, AH and RIS domains IPR045600 RelA/SpoT, AH and RIS domains 493 638 1.9E-6
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432 - - 11 218 9.3E-45
CDD cd05399 NT_Rel-Spo_like IPR007685 RelA/SpoT 238 360 1.4441E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.