Pseudomonas aeruginosa UCBPP-PA14, PA14_52210 (cysM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004124 cysteine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006535 cysteine biosynthetic process from serine
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Cysteine metabolism; Selenoamino acid metabolism; Sulfur metabolism  ECO:0000037
not_recorded
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 116 136 -
NCBIfam TIGR01136 JCVI: cysteine synthase IPR005856 Cysteine synthase 9 296 4.4E-124
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 39 157 1.1E-111
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 42 151 3.1E-43
FunFam G3DSA:3.40.50.1100:FF:000029 Cysteine synthase - - 152 293 4.9E-75
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 9 297 2.2E-93
CDD cd01561 CBS_like - - 13 292 0.0
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 9 285 5.5E-68
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 8 292 1.1E-111
NCBIfam TIGR01138 JCVI: cysteine synthase B IPR005858 Cysteine synthase CysM 7 296 0.0
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 5 294 2.23E-90

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.