Pseudomonas aeruginosa UCBPP-PA14, PA14_52310 (dinP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003684 damaged DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11799
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11799
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class
Adaptation, Protection Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.1170.60:FF:000001 DNA polymerase IV - - 21 73 3.1E-26
Gene3D G3DSA:3.30.1490.100 - IPR036775 DNA polymerase, Y-family, little finger domain superfamily 241 349 7.5E-24
SUPERFAMILY SSF56672 DNA/RNA polymerases IPR043502 DNA/RNA polymerase superfamily 1 234 9.78E-94
Pfam PF00817 impB/mucB/samB family IPR001126 UmuC domain 7 154 3.1E-52
FunFam G3DSA:3.30.1490.100:FF:000011 DNA polymerase IV - - 241 349 2.3E-66
CDD cd03586 PolY_Pol_IV_kappa IPR022880 DNA polymerase IV 5 337 0.0
Gene3D G3DSA:1.10.150.20 - - - 170 228 2.0E-19
FunFam G3DSA:3.30.70.270:FF:000002 DNA polymerase IV - - 69 165 3.1E-40
FunFam G3DSA:1.10.150.20:FF:000019 DNA polymerase IV - - 167 228 6.5E-25
SUPERFAMILY SSF100879 Lesion bypass DNA polymerase (Y-family), little finger domain IPR036775 DNA polymerase, Y-family, little finger domain superfamily 242 348 1.96E-23
PANTHER PTHR11076 DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER - - 2 340 4.8E-97
Pfam PF11799 impB/mucB/samB family C-terminal domain IPR017961 DNA polymerase, Y-family, little finger domain 240 339 2.7E-6
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 1 169 2.8E-40
Pfam PF11798 IMS family HHH motif IPR024728 DNA polymerase type-Y, HhH motif 169 197 5.6E-6
Hamap MF_01113 DNA polymerase IV [dinB]. IPR022880 DNA polymerase IV 1 348 38.123188
Gene3D G3DSA:3.40.1170.60 - - - 21 72 1.5E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.