Pseudomonas aeruginosa UCBPP-PA14, PA14_53260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00290 Valine, leucine and isoleucine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site 42 56 -
Gene3D G3DSA:3.40.50.1100 51 148 2.6E-75
PIRSF PIRSF006278 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase 256 308 130.0
Gene3D G3DSA:3.40.50.1100 149 308 2.6E-75
SUPERFAMILY SSF53686 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme 7 312 5.89E-74
CDD cd01562 Thr-dehyd 5 308 7.73895E-113
Gene3D G3DSA:3.40.50.1100 18 50 2.6E-75
PIRSF PIRSF006278 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase 2 229 2.7E-7
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Pyridoxal-phosphate dependent enzyme 21 304 3.2E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.