Pseudomonas aeruginosa UCBPP-PA14, PA14_53940 (prpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51621
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046421 methylisocitrate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02317
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019629 propionate catabolic process, 2-methylcitrate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02317
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other UCBPP-PA14 genes in this class
Carbon compound catabolism Other UCBPP-PA14 genes in this class
Fatty acid and phospholipid metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13714 Phosphoenolpyruvate phosphomutase - - 19 256 8.3E-46
PANTHER PTHR42905 PHOSPHOENOLPYRUVATE CARBOXYLASE - - 4 287 1.3E-84
FunFam G3DSA:3.20.20.60:FF:000009 2-methylisocitrate lyase - - 4 297 0.0
Hamap MF_01939 2-methylisocitrate lyase [prpB]. IPR012695 2-methylisocitrate lyase 4 295 51.604546
Coils Coil Coil - - 281 298 -
Gene3D G3DSA:3.20.20.60 - IPR040442 Pyruvate kinase-like domain superfamily 2 297 6.1E-105
SUPERFAMILY SSF51621 Phosphoenolpyruvate/pyruvate domain IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily 8 292 2.02E-100
CDD cd00377 ICL_PEPM IPR039556 ICL/PEPM domain 12 255 1.40963E-94
NCBIfam TIGR02317 JCVI: methylisocitrate lyase IPR012695 2-methylisocitrate lyase 9 293 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.