Pseudomonas aeruginosa UCBPP-PA14, PA14_53950 (prpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0036440 citrate synthase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0795
ECO:0000249
sequence similarity evidence used in automatic assertion
7626013
Cellular Component GO:0045239 tricarboxylic acid cycle enzyme complex
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0795
ECO:0000249
sequence similarity evidence used in automatic assertion
7626013
Biological Process GO:0006099 tricarboxylic acid cycle
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0795
ECO:0000249
sequence similarity evidence used in automatic assertion
7626013
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00480
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01800
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48256
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class
Central intermediary metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00020 Citrate cycle (TCA cycle) InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
UniPathway UPA00223 tricarboxylic acid cycle InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00630 Glyoxylate and dicarboxylate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 126 139 7.5E-41
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 198 226 7.5E-41
SUPERFAMILY SSF48256 IPR036969 Citrate synthase superfamily 10 375 3.01E-128
Gene3D G3DSA:1.10.580.10 IPR016142 Citrate synthase-like, large alpha subdomain 32 223 2.0E-123
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 308 324 7.5E-41
Pfam PF00285 Citrate synthase, C-terminal domain IPR002020 Citrate synthase 11 357 6.5E-120
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 328 342 7.5E-41
Gene3D G3DSA:1.10.230.10 IPR016143 Citrate synthase-like, small alpha subdomain 224 322 2.0E-123
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 176 191 7.5E-41
ProSitePatterns PS00480 Citrate synthase signature. IPR019810 Citrate synthase active site 258 270 -
PIRSF PIRSF001369 IPR024176 Citrate synthase, bacterial-type 3 375 3.4E-119
Gene3D G3DSA:1.10.580.10 IPR016142 Citrate synthase-like, large alpha subdomain 323 355 2.0E-123
TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II IPR011278 2-methylcitrate synthase/citrate synthase type I 11 375 2.2E-155
CDD cd06108 Ec2MCS_like 10 372 0.0
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 251 271 7.5E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.