Pseudomonas aeruginosa UCBPP-PA14, PA14_53980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016853 isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02334
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019629 propionate catabolic process, 2-methylcitrate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02334
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.10.310.10:FF:000018 2-methylaconitate cis-trans isomerase - - 6 187 1.3E-96
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 182 374 0.0
Pfam PF04303 PrpF protein IPR007400 PrpF-like 6 391 0.0
PANTHER PTHR43709 ACONITATE ISOMERASE-RELATED IPR007400 PrpF-like 5 390 0.0
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 8 386 0.0
SUPERFAMILY SSF54506 Diaminopimelate epimerase-like - - 189 393 3.92E-78
SUPERFAMILY SSF54506 Diaminopimelate epimerase-like - - 4 181 5.49E-68
NCBIfam TIGR02334 JCVI: 2-methylaconitate cis-trans isomerase PrpF IPR012709 2-methyl-aconitate isomerase PrpF 5 395 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.