Pseudomonas aeruginosa UCBPP-PA14, PA14_54170 (putA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0010133 proline catabolic process to glutamate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0782
ECO:0000249
sequence similarity evidence used in automatic assertion
6819140
Molecular Function GO:0004657 proline dehydrogenase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0782
ECO:0000249
sequence similarity evidence used in automatic assertion
6819140
Molecular Function GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0782
ECO:0000249
sequence similarity evidence used in automatic assertion
6819140
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.309.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004657 proline dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01238
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0010133 proline catabolic process to glutamate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.605.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006561 proline biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01238
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc (5<i>R</i>)-carbapenem carboxylate biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Arginine and proline metabolism; Glutamate metabolism ECO:0000037
not_recorded
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc ethylene biosynthesis II (microbes) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 IPR016162 Aldehyde dehydrogenase, N-terminal 565 1039 0.0
Gene3D G3DSA:3.40.309.10 Aldehyde Dehydrogenase; Chain A, domain 2 IPR016163 Aldehyde dehydrogenase, C-terminal 816 1007 0.0
NCBIfam TIGR01238 JCVI: L-glutamate gamma-semialdehyde dehydrogenase IPR005933 Bifunctional protein PutA, C-terminal domain 533 1037 0.0
PANTHER PTHR42862 DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED - - 165 1055 0.0
Pfam PF14850 DNA-binding domain of Proline dehydrogenase IPR024082 Proline dehydrogenase PutA, domain II 74 187 1.5E-45
FunFam G3DSA:3.40.309.10:FF:000005 1-pyrroline-5-carboxylate dehydrogenase 1 - - 816 1007 1.0E-56
Gene3D G3DSA:1.20.5.460 Single helix bin - - 88 113 2.5E-13
PIRSF PIRSF000197 Bifunct_PutA IPR025703 Bifunctional protein PutA 4 1057 0.0
FunFam G3DSA:3.20.20.220:FF:000004 Bifunctional protein PutA - - 146 532 0.0
SUPERFAMILY SSF51730 FAD-linked oxidoreductase IPR029041 FAD-linked oxidoreductase-like 190 540 4.32E-114
SUPERFAMILY SSF81935 N-terminal domain of bifunctional PutA protein IPR024089 Proline dehydrogenase PutA, domain I/II 19 189 1.83E-62
Pfam PF01619 Proline dehydrogenase IPR002872 Proline dehydrogenase domain 197 496 1.2E-90
Gene3D G3DSA:3.20.20.220 - - - 144 532 1.3E-120
CDD cd07125 ALDH_PutA-P5CDH - - 490 1054 0.0
SUPERFAMILY SSF53720 ALDH-like IPR016161 Aldehyde/histidinol dehydrogenase 553 1042 2.62E-127
Pfam PF00171 Aldehyde dehydrogenase family IPR015590 Aldehyde dehydrogenase domain 583 1037 5.8E-113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.