Pseudomonas aeruginosa UCBPP-PA14, PA14_55400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 1132 4930574 4930605 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: CCCAGGGCGT-N17-ACGCCCTGGG 4918572 4918608 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: TGCCGGCGGG-N85-CCCGCCGGCA 4921771 4921875 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CTGGGCGCCG-N100-CGGCGCCCAG 4923359 4923478 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: AGCCCAGCGCCA-N18-TGGCGCTGGGCT 4923733 4923774 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GAGATCGTCGGC-N45-GCCGACGATCTC 4924700 4924768 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GCCCGGCCTG-N75-CAGGCCGGGC 4925131 4925225 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CAGGCCGCCC-N61-GGGCGGCCTG 4930043 4930123 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 1131 4917849 4917868 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details