Pseudomonas aeruginosa UCBPP-PA14, PA14_55430 (hxcS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 56 172 3.7E-33
Coils Coil Coil - - 145 165 -
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 273 395 5.3E-28
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 66 78 7.0E-29
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 71 193 6.9E-32
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 256 367 5.6E-26
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 384 403 7.0E-29
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 368 382 7.0E-29
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 258 373 2.5E-27
NCBIfam TIGR02120 JCVI: type II secretion system inner membrane protein GspF IPR011850 Type II secretion system protein GspF 4 403 0.0
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 165 193 7.0E-29
PANTHER PTHR30012 GENERAL SECRETION PATHWAY PROTEIN IPR003004 GspF/PilC family 1 403 4.9E-124
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 56 172 1.1E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.