Pseudomonas aeruginosa UCBPP-PA14, PA14_60210 (rluD)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_60210
Name	rluD
Replicon	chromosome
Genomic location	5363320 - 5364282 (- strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	4 transposon mutants in orthologs

Cross-References

RefSeq	YP_793005.1
GI	116052689
Entrez	4384541
INSDC	ABJ13925.1
NCBI Locus Tag	PA14_60210
UniParc	UPI0000134295
UniProtKB Acc	Q02GD1
UniProtKB ID	Q02GD1_PSEAB
UniRef100	UniRef100_P33640
UniRef50	UniRef50_P33640
UniRef90	UniRef90_P33640

Product

Feature Type	CDS
Coding Frame	1
Product Name	pseudouridine synthase
Synonyms
Evidence for Translation
Charge (pH 7)	2.09
Kyte-Doolittle Hydrophobicity Value	-0.121
Molecular Weight (kDa)	35.6
Isoelectric Point (pI)	7.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004205 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_60210 Search term: rluD Search term: pseudouridine synthase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000433065 RNA pseudouridine synthase D4 [Source:HGNC Symbol;Acc:HGNC:25898] E-value: 3.5e-14 Percent Identity: 30.1

References