Pseudomonas aeruginosa UCBPP-PA14, PA14_71250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0031457 glycine betaine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5397
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379
Biological Process GO:0042426 choline catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5397
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF19367 Domain of unknown function (DUF5943) IPR045987 Domain of unknown function DUF5943 5 98 1.4E-49
PANTHER PTHR35090 DNA-DIRECTED RNA POLYMERASE SUBUNIT I - - 10 175 2.8E-32
SMART SM00989 V4R_2_a IPR004096 4-vinyl reductase, 4VR 107 175 3.7E-4
SUPERFAMILY SSF111126 Ligand-binding domain in the NO signalling and Golgi transport IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily 6 144 2.98E-17
Gene3D G3DSA:3.30.1380.20 Trafficking protein particle complex subunit 3 - - 28 156 2.3E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.