Pseudomonas aeruginosa UCBPP-PA14, PA14_71260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0031457 glycine betaine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5398
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379
Biological Process GO:0042426 choline catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5398
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17951379
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class
Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 380 2.7E-106
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 608 624 1.9E-5
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 393 412 1.9E-5
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 380 683 2.07E-33
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 487 616 2.8E-64
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 660 667 3.9E-7
Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal 6 342 5.4E-66
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 609 623 3.9E-7
Gene3D G3DSA:3.40.50.720 - - - 392 679 2.8E-64
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 4 370 5.64E-98
PANTHER PTHR43656 BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G08260)-RELATED - - 1 647 0.0
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 392 414 3.9E-7
FunFam G3DSA:3.20.20.70:FF:000102 Putative N-methylproline demethylase - - 1 380 0.0
CDD cd04734 OYE_like_3_FMN - - 6 352 0.0
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 392 643 4.2E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.