Pseudomonas aeruginosa UCBPP-PA14, PA14_71280

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0031457	glycine betaine catabolic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5399	ECO:0000249 sequence similarity evidence used in automatic assertion	17951379
Biological Process	GO:0042426	choline catabolic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5399	ECO:0000249 sequence similarity evidence used in automatic assertion	17951379
Molecular Function	GO:0051536	iron-sulfur cluster binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1060.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13183	4Fe-4S dicluster domain	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	242	336	1.1E-11
SUPERFAMILY	SSF46548	alpha-helical ferredoxin	-	-	222	352	2.27E-19
Pfam	PF11982	Domain of unknown function (DUF3483)	IPR021872	Protein of unknown function DUF3483	4	220	1.1E-86
PANTHER	PTHR43255	IRON-SULFUR-BINDING OXIDOREDUCTASE FADF-RELATED-RELATED	-	-	19	632	0.0
Pfam	PF02754	Cysteine-rich domain	IPR004017	Cysteine-rich domain	525	611	1.1E-13
Gene3D	G3DSA:1.10.1060.10	-	IPR009051	Alpha-helical ferredoxin	220	357	5.3E-28
FunFam	G3DSA:1.10.1060.10:FF:000014	DgcB, Dimethylglycine catabolism	-	-	218	357	5.5E-82
Pfam	PF02754	Cysteine-rich domain	IPR004017	Cysteine-rich domain	402	481	0.0084

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.