Pseudomonas aeruginosa UCBPP-PA14, PA14_71850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00091 pas_2 IPR000014 PAS domain 277 342 46.0
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 377 943 0.0
SMART SM00091 pas_2 IPR000014 PAS domain 400 466 2.6E-8
CDD cd01949 GGDEF IPR000160 GGDEF domain 526 684 1.21715E-53
Coils Coil Coil - - 690 710 -
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 697 950 6.1E-102
Pfam PF00563 EAL domain IPR001633 EAL domain 703 936 4.6E-73
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 526 681 3.4E-41
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 697 950 1.0E-94
SMART SM00267 duf1_3 IPR000160 GGDEF domain 514 686 3.6E-52
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 526 684 2.8E-32
Gene3D G3DSA:3.30.450.20 PAS domain - - 397 529 7.2E-32
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 323 398 1.8E-7
CDD cd00130 PAS IPR000014 PAS domain 319 389 1.05331E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 391 511 4.54E-24
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 530 695 2.2E-50
Pfam PF13426 PAS domain IPR000014 PAS domain 411 512 6.6E-16
CDD cd00130 PAS IPR000014 PAS domain 409 511 1.82351E-11
Coils Coil Coil - - 212 264 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 269 388 1.1E-28
Pfam PF08447 PAS fold IPR013655 PAS fold-3 316 385 4.4E-17
SMART SM00086 pac_2 IPR001610 PAC motif 349 392 1.0E-6
SMART SM00086 pac_2 IPR001610 PAC motif 472 514 0.0021
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 701 948 1.96E-91
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 319 394 2.79E-14
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 530 688 1.33E-42
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 397 521 2.2E-19
CDD cd01948 EAL IPR001633 EAL domain 702 941 6.44518E-103
SMART SM00052 duf2_2 IPR001633 EAL domain 696 941 8.0E-119

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.