Pseudomonas aeruginosa UCBPP-PA14, PA14_72590 (znuB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0010043 response to zinc ion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5501
ECO:0000249
sequence similarity evidence used in automatic assertion
24086521
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF81345 ABC transporter involved in vitamin B12 uptake, BtuC IPR037294 ABC transporter, BtuC-like 3 253 7.72E-40
Pfam PF00950 ABC 3 transport family IPR001626 ABC transporter, TroCD-like 2 256 2.5E-78
FunFam G3DSA:1.10.3470.10:FF:000002 Zinc ABC transporter permease subunit ZnuB - - 5 261 3.5E-129
PANTHER PTHR30477 ABC-TRANSPORTER METAL-BINDING PROTEIN IPR001626 ABC transporter, TroCD-like 3 259 4.6E-72
CDD cd06550 TM_ABC_iron-siderophores_like - - 20 255 1.80795E-29
Gene3D G3DSA:1.10.3470.10 ABC transporter involved in vitamin B12 uptake, BtuC IPR037294 ABC transporter, BtuC-like 4 261 3.9E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.