Pseudomonas aeruginosa UCBPP-PA14, PA14_72650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0097367 carbohydrate derivative binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30514
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30514
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30514
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30514
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1901135 carbohydrate derivative metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53697
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30514 GLUCOKINASE IPR047640 HTH-type transcriptional regulator RpiR-like 1 276 1.8E-56
CDD cd05013 SIS_RpiR IPR035472 RpiR-like, SIS domain 120 254 5.02622E-27
Pfam PF01380 SIS domain IPR001347 SIS domain 135 253 3.2E-12
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 2 78 3.05E-15
Gene3D G3DSA:3.40.50.10490 - - - 95 278 5.4E-25
Pfam PF01418 Helix-turn-helix domain, rpiR family IPR000281 Helix-turn-helix protein RpiR 5 72 2.5E-11
SUPERFAMILY SSF53697 SIS domain IPR046348 SIS domain superfamily 97 266 5.78E-16
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 76 3.8E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.