Pseudomonas aeruginosa UCBPP-PA14, PA14_73020

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0070063	RNA polymerase binding	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5536	ECO:0000249 sequence similarity evidence used in automatic assertion	23416301
Molecular Function	GO:0008270	zinc ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_00926	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class Transcriptional regulators Other UCBPP-PA14 genes in this class Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain	IPR037187	DksA, N-terminal domain superfamily	1	92	3.92E-24
SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	-	-	93	131	2.71E-9
Hamap	MF_00926	RNA polymerase-binding transcription factor DksA [dksA].	IPR012784	RNA polymerase-binding transcription factor DksA	11	132	27.460869
Coils	Coil	Coil	-	-	71	91	-
FunFam	G3DSA:1.20.120.910:FF:000005	RNA polymerase-binding transcription factor DksA	-	-	1	134	1.0E-88
PANTHER	PTHR33823	RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR DKSA-RELATED	-	-	15	130	4.7E-29
Pfam	PF01258	Prokaryotic dksA/traR C4-type zinc finger	IPR000962	Zinc finger, DksA/TraR C4-type	91	126	4.7E-11
Gene3D	G3DSA:1.20.120.910	-	-	-	1	134	6.6E-42
NCBIfam	TIGR02420	JCVI: RNA polymerase-binding protein DksA	IPR012784	RNA polymerase-binding transcription factor DksA	15	123	1.5E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.