Pseudomonas aeruginosa UCBPP-PA14, PA14_73370 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell division Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 5 622 42.542809
Gene3D G3DSA:1.10.10.1800 - - - 459 557 1.9E-26
Pfam PF13932 tRNA modifying enzyme MnmG/GidA C-terminal domain IPR026904 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal 402 614 4.8E-77
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 9 28 8.4E-5
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 148 166 8.4E-5
NCBIfam TIGR00136 JCVI: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 7 620 0.0
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 294 458 4.0E-57
PANTHER PTHR11806 GLUCOSE INHIBITED DIVISION PROTEIN A IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related 6 625 0.0
FunFam G3DSA:1.10.150.570:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 567 620 4.4E-23
Pfam PF01134 Glucose inhibited division protein A IPR040131 MnmG, N-terminal domain 8 399 0.0
FunFam G3DSA:3.50.50.60:FF:000002 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 295 458 3.1E-86
FunFam G3DSA:1.10.10.1800:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 459 548 5.6E-26
FunFam G3DSA:3.50.50.60:FF:000010 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 2 233 3.2E-128
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 2 232 9.5E-88
Gene3D G3DSA:1.10.150.570 - IPR044920 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamily 567 619 7.6E-24
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 7 261 1.43E-52
SMART SM01228 GIDA_assoc_3_2 IPR047001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain 544 615 3.5E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.