Pseudomonas stutzeri A1501, PST_2554 (ccmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03379 CcmB protein IPR003544 Cytochrome c-type biogenesis protein CcmB 7 218 3.2E-70
NCBIfam TIGR01190 JCVI: heme exporter protein CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 8 218 8.0E-85
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 195 218 2.7E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 78 101 2.7E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 29 50 2.7E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 55 72 2.7E-70
PIRSF PIRSF002764 CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 1 222 3.8E-80
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 134 157 2.7E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 103 121 2.7E-70
PANTHER PTHR30070 HEME EXPORTER PROTEIN B IPR003544 Cytochrome c-type biogenesis protein CcmB 1 207 1.0E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.