Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PANTHER | PTHR30419 | HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD | - | - | 1 | 298 | 1.6E-61 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 20 | 31 | 2.0E-5 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 64 | 9.6E-19 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 3 | 90 | 3.0E-20 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 92 | 299 | 2.29E-37 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 2 | 113 | 5.99E-19 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 95 | 305 | 5.6E-32 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 31 | 41 | 2.0E-5 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 89 | 296 | 4.3E-39 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 41 | 52 | 2.0E-5 |