Pseudomonas syringae pv. tomato DC3000, PSPTO_0848

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0848
NCBI Old Locus Tag	PSPTO0848
Name	Synonym: PSPTO0848
Replicon	chromosome
Genomic location	916412 - 917785 (- strand)

Cross-References

RefSeq	NP_790688.1
GI	28868069
Entrez	1182477
INSDC	AAO54383.1
NCBI Locus Tag	PSPTO_0848
NCBI Old Locus Tag	PSPTO0848
UniParc	UPI00000085B7
UniProtKB Acc	Q889B3
UniProtKB ID	Q889B3_PSESM
UniRef100	UniRef100_Q889B3
UniRef50	UniRef50_Q8GPV2
UniRef90	UniRef90_Q4LBG7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.94
Kyte-Doolittle Hydrophobicity Value	-0.254
Molecular Weight (kDa)	47.7
Isoelectric Point (pI)	6.09

Subcellular localization

Individual Mappings	Localization Confidence PMID Extracellular Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 53 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017369 (36 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0848

Human Homologs

References