Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3354 (cheW2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00260 chew_2 IPR002545 CheW-like domain 11 148 8.5E-52
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 17 142 6.4E-44
PANTHER PTHR22617 CHEMOTAXIS SENSOR HISTIDINE KINASE-RELATED IPR039315 Chemotaxis protein CheW 6 158 7.4E-48
CDD cd00732 CheW - - 13 152 1.16205E-59
FunFam G3DSA:2.40.50.180:FF:000001 Chemotaxis protein CheW - - 34 101 1.6E-39
Gene3D G3DSA:2.40.50.180 - - - 34 143 6.4E-44
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 11 154 6.67E-42
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 15 151 7.6E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.