Pseudomonas sp. UW4, PputUW4_03385 (pheT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00283
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006432 phenylalanyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00283
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02796
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000287 magnesium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00283
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004826 phenylalanine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.380 - IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily 699 792 9.5E-27
NCBIfam TIGR00472 JCVI: phenylalanine--tRNA ligase subunit beta IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type 1 791 0.0
SUPERFAMILY SSF56037 PheT/TilS domain - - 195 395 3.66E-75
FunFam G3DSA:3.30.70.380:FF:000001 Phenylalanine--tRNA ligase beta subunit - - 699 792 1.5E-29
SUPERFAMILY SSF54991 Anticodon-binding domain of PheRS IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily 692 791 3.66E-30
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 39 153 6.3E-72
Pfam PF03484 tRNA synthetase B5 domain IPR005147 tRNA synthetase, B5-domain 405 471 2.5E-20
FunFam G3DSA:3.30.56.10:FF:000002 Phenylalanine--tRNA ligase beta subunit - - 401 475 5.0E-23
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 36 195 2.15E-49
FunFam G3DSA:3.30.930.10:FF:000022 Phenylalanine--tRNA ligase beta subunit - - 487 689 3.1E-70
Gene3D G3DSA:3.30.56.10 - - - 6 180 6.3E-72
SUPERFAMILY SSF46955 Putative DNA-binding domain IPR009061 Putative DNA-binding domain superfamily 403 475 1.28E-17
Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type 1 785 46.905968
FunFam G3DSA:3.50.40.10:FF:000001 Phenylalanine--tRNA ligase beta subunit - - 195 396 1.3E-81
SMART SM00896 FDX_ACB_2 IPR005121 Ferrodoxin-fold anticodon-binding domain 698 791 1.2E-43
Pfam PF03483 B3/4 domain IPR005146 B3/B4 tRNA-binding domain 211 384 9.1E-71
PANTHER PTHR10947 PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 IPR045060 Phenylalanine-tRNA ligase, class IIc, beta subunit 3 683 3.3E-74
Pfam PF03147 Ferredoxin-fold anticodon binding domain IPR005121 Ferrodoxin-fold anticodon-binding domain 698 791 7.1E-29
CDD cd02796 tRNA_bind_bactPheRS IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain 45 146 3.91971E-50
Gene3D G3DSA:3.30.56.10 - - - 400 475 4.0E-23
Gene3D G3DSA:3.30.930.10 Bira Bifunctional Protein; Domain 2 IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 486 688 2.1E-65
FunFam G3DSA:2.40.50.140:FF:000045 Phenylalanine--tRNA ligase beta subunit - - 39 153 4.0E-45
Pfam PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain 474 682 1.8E-59
CDD cd00769 PheRS_beta_core IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain 498 681 9.41995E-70
SMART SM00874 B5_2 IPR005147 tRNA synthetase, B5-domain 402 471 7.9E-27
Gene3D G3DSA:3.50.40.10 - IPR020825 Phenylalanyl-tRNA synthetase-like, B3/B4 196 394 1.4E-79
Pfam PF01588 Putative tRNA binding domain IPR002547 tRNA-binding domain 45 144 1.9E-24
SUPERFAMILY SSF55681 Class II aaRS and biotin synthetases IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 467 683 1.44E-54
SMART SM00873 B3_4_2 IPR005146 B3/B4 tRNA-binding domain 211 384 1.8E-96

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.