Pseudomonas sp. UW4, PputUW4_03389 (infC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003743 translation initiation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54364
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006413 translational initiation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.110.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.110.10:FF:000001 Translation initiation factor IF-3 - - 82 177 3.4E-45
NCBIfam TIGR00168 JCVI: translation initiation factor IF-3 IPR001288 Translation initiation factor 3 10 176 5.1E-78
Gene3D G3DSA:3.30.110.10 - IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily 82 177 1.3E-33
Pfam PF05198 Translation initiation factor IF-3, N-terminal domain IPR019814 Translation initiation factor 3, N-terminal 13 78 7.7E-28
Gene3D G3DSA:3.10.20.80 - IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily 9 81 2.9E-28
FunFam G3DSA:3.10.20.80:FF:000001 Translation initiation factor IF-3 - - 7 83 1.9E-30
Coils Coil Coil - - 37 57 -
SUPERFAMILY SSF54364 Translation initiation factor IF3, N-terminal domain IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily 12 84 1.03E-25
SUPERFAMILY SSF55200 Translation initiation factor IF3, C-terminal domain IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily 89 177 7.72E-33
Hamap MF_00080 Translation initiation factor IF-3 [infC]. IPR001288 Translation initiation factor 3 3 176 29.629295
PANTHER PTHR10938 TRANSLATION INITIATION FACTOR IF-3 IPR001288 Translation initiation factor 3 7 177 1.6E-51
Pfam PF00707 Translation initiation factor IF-3, C-terminal domain IPR019815 Translation initiation factor 3, C-terminal 89 174 1.6E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.