Pseudomonas sp. UW4, PputUW4_03401 (rbsA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03401
Name
rbsA
Replicon chromosome
Genomic location 3958402 - 3959955 (- strand)

Cross-References

RefSeq YP_007030399.1
GI 426410300
EC Number 3.6.3.17
Entrez 14054414
NCBI Locus Tag PputUW4_03401

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.68
Kyte-Doolittle Hydrophobicity Value 0.105
Molecular Weight (kDa) 55406.2
Isoelectric Point (pI) 5.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000134 (908 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03401
Search term: rbsA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 9.9e-11
Percent Identity: 24.0
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 9.9e-11
Percent Identity: 24.0

References

No references are associated with this feature.