Pseudomonas aeruginosa PAO1, PA0887.1 (P7)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GACCCCGCGCGG-N6-CCGCGCGGGGTC 971645 971674 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 237 971645 971674 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
-35 region 971949 971954 +
Details
ArgR binding site 971961 972005 +
9791103 Details
Putative -35 element (sigma 70) 971949 971954 +
9791103 Details
ArgR binding site 971963 972005 + ECO:0000314
direct assay evidence used in manual assertion
20869215 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
-10 region 971975 971980 +
Details
transcriptional initiation site (+1) 971986 971986 +
Details
-35 region 972000 972005 +
Details
-10 region 972022 972027 +
Details
transcriptional initiation site (+1) 972035 972035 +
Details
aot promoter2 971990 972039 +
Details
transcription initiation site, P2 972035 972035 +
9791103 Details
Putative -10 element (sigma 70) 972022 972027 +
9791103 Details
Putative -35 element (sigma 70) 972000 972005 +
9791103 Details
ArgR binding site 971961 972005 +
9791103 Details
Putative -10 element (sigma 70) 971975 971980 +
9791103 Details
transcription initiation site, P1 971986 971986 +
9791103 Details
ArgR binding site 971963 972005 + ECO:0000314
direct assay evidence used in manual assertion
20869215 Details
Shine-Dalgarno sequence 972155 972159 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details