Pseudomonas denitrificans ATCC 13867, H681_24480
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCGCTCCTAC-N32-GTAGGAGCGG | 5488970 | 5489021 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCTTGCTCGCGAAC-N31-GTTCGCGAGCAAGC | 5489022 | 5489080 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCGCGTCCTGC-N55-GCAGGACGCGG | 5488462 | 5488538 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGTAGGAGCGAG-N76-CTCGCTCCTACA | 5488138 | 5488237 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGCTCGCGAAC-N35-GTTCGCGAGCAA | 5488151 | 5488209 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1734 | 5488044 | 5488070 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |