Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PANTHER | PTHR30419 | HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD | - | - | 11 | 304 | 3.8E-63 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 116 | 5.99E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 1.6E-5 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 12 | 68 | 4.3E-16 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 96 | 301 | 3.58E-36 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 99 | 309 | 1.0E-30 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 7 | 94 | 7.7E-21 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 94 | 300 | 1.4E-38 |
Coils | Coil | Coil | - | - | 289 | 309 | - |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 1.6E-5 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 1.6E-5 |