Pseudomonas aeruginosa LESB58, PALES_38371

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_38371
Name
Replicon chromosome
Genomic location 4245175 - 4245969 (- strand)

Cross-References

RefSeq YP_002441420
GI 218892551
Entrez 7178020

Product

Feature Type CDS
Coding Frame 1
Product Name
putative short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -4.58
Kyte-Doolittle Hydrophobicity Value 0.216
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001279 (401 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_38371

Human Homologs

Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 4.0e-24
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 4.0e-24
Percent Identity: 35.1

References

No references are associated with this feature.