Pseudomonas aeruginosa PAO1, PA0140 (ahpF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0140
Name
ahpF
Replicon chromosome
Genomic location 158907 - 160472 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_248830.1
GI 15595338
Affymetrix PA0140_ahpF_at
Entrez 879326
GenBank AAG03530.1
INSDC AAG03530.1
NCBI Locus Tag PA0140
protein_id(GenBank) gb|AAG03530.1|AE004452_2|gnl|PseudoCAP|PA0140
TIGR NTL03PA00141
UniParc UPI00000C4F5C
UniProtKB Acc Q9I6Z2
UniProtKB ID AHPF_PSEAE
UniRef100 UniRef100_Q9I6Z2
UniRef50 UniRef50_P35340
UniRef90 UniRef90_Q9I6Z2

Product

Feature Type CDS
Coding Frame 1
Product Name
alkyl hydroperoxide reductase subunit F
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -12.95
Kyte-Doolittle Hydrophobicity Value -0.002
Molecular Weight (kDa) 55.8
Isoelectric Point (pI) 5.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 2
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 661 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000138 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0140
Search term: ahpF

References

Isolation and analysis of the Xanthomonas alkyl hydroperoxide reductase gene and the peroxide sensor regulator genes ahpC and ahpF-oxyR-orfX.
Loprasert S, Atichartpongkun S, Whangsuk W, Mongkolsuk S
J. Bacteriol. 1997 Jun;179(12):3944-9
PubMed ID: 9190810