Pseudomonas aeruginosa PAO1, PA0262 (vgrG2b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0262
Name
vgrG2b
Replicon chromosome
Genomic location 293802 - 296861 (- strand)
Transposon Mutants 13 transposon mutants in PAO1
Transposon Mutants in orthologs 10 transposon mutants in orthologs

Cross-References

RefSeq NP_248953.1
GI 15595459
Affymetrix PA0262_at
Entrez 881981
GenBank AAG03651.1
INSDC AAG03651.1
NCBI Locus Tag PA0262
protein_id(GenBank) gb|AAG03651.1|AE004464_4|gnl|PseudoCAP|PA0262
TIGR NTL03PA00263
UniParc UPI00000C4FCB
UniProtKB Acc Q9I6M7
UniProtKB ID Q9I6M7_PSEAE
UniRef100 UniRef100_Q9I6M7
UniRef50 UniRef50_Q9I3K1
UniRef90 UniRef90_Q9I3K1

Product

Feature Type CDS
Coding Frame 1
Product Name
VgrG2b
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -19.34
Kyte-Doolittle Hydrophobicity Value -0.478
Molecular Weight (kDa) 113.0
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 146 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0262
Search term: vgrG2b
Search term: VgrG2b

References

Rhs elements comprise three subfamilies which diverged prior to acquisition by Escherichia coli.
Wang YD, Zhao S, Hill CW
J. Bacteriol. 1998 Aug;180(16):4102-10
PubMed ID: 9696756
Type VI secretion system in Pseudomonas aeruginosa: secretion and multimerization of VgrG proteins.
Hachani A, Lossi NS, Hamilton A, Jones C, Bleves S, Albesa-Jové D, Filloux A
J. Biol. Chem. 2011 Apr;286(14):12317-27
PubMed ID: 21325275