Pseudomonas aeruginosa PAO1, PA0564

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0564
Name
Replicon chromosome
Genomic location 620666 - 621577 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_249255.1
GI 15595761
Affymetrix PA0564_at
DNASU PaCD00006245
Entrez 879206
GenBank AAG03953.1
INSDC AAG03953.1
NCBI Locus Tag PA0564
protein_id(GenBank) gb|AAG03953.1|AE004492_12|gnl|PseudoCAP|PA0564
TIGR NTL03PA00565
UniParc UPI00000C50B9
UniProtKB Acc Q9I5X2
UniProtKB ID Q9I5X2_PSEAE
UniRef100 UniRef100_W0YKT1
UniRef50 UniRef50_A6UZ27
UniRef90 UniRef90_A6UZ27

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.77
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 33.4
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 389 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000548 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0564

References

No references are associated with this feature.