Pseudomonas aeruginosa PAO1, PA0610 (prtN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0610
Name
prtN
Replicon chromosome
Genomic location 672777 - 673091 (- strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249301.1
GI 15595807
Affymetrix PA0610_prtN_at
DNASU PaCD00006268
Entrez 877720
GenBank AAG03999.1
INSDC AAG03999.1
NCBI Locus Tag PA0610
protein_id(GenBank) gb|AAG03999.1|AE004497_6|gnl|PseudoCAP|PA0610
TIGR NTL03PA00611
UniParc UPI00001323D5
UniProtKB Acc Q06552
UniProtKB ID PRTN_PSEAE
UniRef100 UniRef100_Q06552
UniRef50 UniRef50_Q06552
UniRef90 UniRef90_Q06552

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator PrtN
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.43
Kyte-Doolittle Hydrophobicity Value -0.262
Molecular Weight (kDa) 11.5
Isoelectric Point (pI) 8.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000593 (342 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0610
Search term: prtN

References

Regulation of pyocin genes in Pseudomonas aeruginosa by positive (prtN) and negative (prtR) regulatory genes.
Matsui H, Sano Y, Ishihara H, Shinomiya T
J. Bacteriol. 1993 Mar;175(5):1257-63
PubMed ID: 8444788