Pseudomonas aeruginosa PAO1, PA0615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0615
Name
Replicon chromosome
Genomic location 675861 - 676376 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249306.1
GI 15595812
Affymetrix PA0615_at
Entrez 880902
GenBank AAG04004.1
INSDC AAG04004.1
NCBI Locus Tag PA0615
protein_id(GenBank) gb|AAG04004.1|AE004497_11|gnl|PseudoCAP|PA0615
TIGR NTL03PA00616
UniParc UPI00000C4EDB
UniProtKB Acc G3XD82
UniProtKB ID G3XD82_PSEAE
UniRef100 UniRef100_G3XD82
UniRef50 UniRef50_A6UZB9
UniRef90 UniRef90_Q02TE8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -10.82
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 19.0
Isoelectric Point (pI) 4.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6U5J ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - postcontracted - collar Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 100.0
6U5F ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - precontracted - collar Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.8 ELECTRON MICROSCOPY 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000598 (261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0615

Human Homologs

References

No references are associated with this feature.