Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0620
|
Name |
|
Replicon | chromosome |
Genomic location | 678821 - 680896 (+ strand) |
Transposon Mutants | 5 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249311.1 |
GI | 15595817 |
Affymetrix | PA0620_at |
Entrez | 877993 |
GenBank | AAG04009.1 |
INSDC | AAG04009.1 |
NCBI Locus Tag | PA0620 |
protein_id(GenBank) | gb|AAG04009.1|AE004498_4|gnl|PseudoCAP|PA0620 |
TIGR | NTL03PA00621 |
UniParc | UPI00000D4281 |
UniProtKB Acc | G3XD71 |
UniProtKB ID | G3XD71_PSEAE |
UniRef100 | UniRef100_Q9S576 |
UniRef50 | UniRef50_Q9S576 |
UniRef90 | UniRef90_Q9S576 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable bacteriophage protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (72.29 kDa, PMID:21751344)
|
Charge (pH 7) | 5.01 |
Kyte-Doolittle Hydrophobicity Value | -0.120 |
Molecular Weight (kDa) | 72.3 |
Isoelectric Point (pI) | 8.39 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6CL6 | VIRAL PROTEIN | 03/01/18 | Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C-terminal residues 323-691 | Pseudomonas aeruginosa | 1.898 | X-RAY DIFFRACTION | 99.7 |
6CT8 | VIRAL PROTEIN | 03/22/18 | Selenomethionine structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.62 | X-RAY DIFFRACTION | 100.0 |
6CU2 | VIRAL PROTEIN | 03/23/18 | Structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.58 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000603 (334 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0620
Search term: probable bacteriophage protein
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
DNA sequences of the tail fiber genes of bacteriophage P2: evidence for horizontal transfer of tail fiber genes among unrelated bacteriophages.
Haggård-Ljungquist E, Halling C, Calendar R
J Bacteriol 1992 Mar;174(5):1462-77
PubMed ID: 1531648
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|